michael donoghue (other plants)    

Wojciechowski, M.F., M.J. Sanderson, B.G. Baldwin, and M.J. Donoghue. 1993. Monophyly of the aneuploid species of Astragalus: evidence from nrDNA internal transcribed spacer sequences. Amer. Jour. Bot. 80:711-722. PDF

Judd, W.S., R.W. Sanders, and M.J. Donoghue. 1994. Angiosperm family pairs-- preliminary phylogenetic analyses. Harvard Papers in Botany 5:1-51. PDF

Baldwin, B. G., M. J. Sanderson, J. M. Porter, M. F. Wojciechowski, C. S. Campbell, and M. J. Donoghue. 1995. The ITS region of nuclear ribosomal DNA: a valuable source of evidence on angiosperm phylogeny. Ann. Missouri Bot. Gard. 82:247- 277. PDF

Campbell, C. S., M. J. Donoghue, B. G. Baldwin, and M. F. Wojciechowski. 1995. Phylogenetic relationships in Maloideae (Rosaceae): Evidence from sequences of internal transcribed spacers of nuclear ribosomal DNA and its congruence with morphology. Amer. Jour. Bot. 82:903-918. PDF

Campbell, C. S., M. F. Wojciechowski, B. G. Baldwin, L. A. Alice, and M. J. Donoghue. 1997. Persistent nuclear ribosomal DNA sequence polymorphism in the Amelanchier agamic complex (Rosaceae). Mol. Biol. Evol. 14:81-90. PDF

Sang, T., M. J. Donoghue, and D. Zhang. 1997. Evolution of alcohol dehydrogenase genes in peonies (Paeonia): Phylogenetic relationships of putative non-hybrid species. Molec. Biol. Evol. 14:994-1007. PDF

Eriksson, T., M. J. Donoghue, and M. S. Hibbs. 1998. Phylogenetic analysis of Potentilla using DNA sequences of nuclear ribosomal internal transcribed spacers (ITS), and implications for the classification of Rosoideae (Rosaceae). Plant Syst. Evol. 211: 155-179. PDF

Ackerly, D. D. and M. J. Donoghue. 1998. Leaf size, sapling allometry, and Corner's rules: Phylogeny and correlated evolution in maples (Acer). Amer. Nat. 152: 767-791. PDF

Li, J. and M. J. Donoghue. 1999. More molecular evidence for the interspecific relationships of Liquidambar (Hamamelidaceae). Rhodora 101: 87-91. PDF

Li, J., A. L. Bogle, and M. J. Donoghue. 1999. Phylogenetic relationships in the Hamamelidoideae inferred from sequences of trn non-coding regions of chloroplast DNA. Harvard Papers in Botany 4: 343-356. PDF

Li, J., A. L. Bogle, A. S. Klein, and M. J. Donoghue. 2000. Phylogeny and biogeography of Hamamelis (Hamamelidaceae). Harvard Papers in Botany 5: 171-178. PDF

Urbatsch, L. E., B. G. Baldwin, and M. J. Donoghue. 2000. Phylogeny of the coneflowers (Heliantheae: Asteraceae) based on nuclear rDNA internal transcribed spacer sequences. Syst. Bot. 25: 539-565. PDF

Li, J., D. E. Boufford, and M. J. Donoghue. 2001. Phylogenetics of Buckleya (Santalaceae) based on ITS sequences of nuclear ribosomal DNA. Rhodora 103: 137-150. PDF

Davis, C. C.., W. R. Anderson, and M. J. Donoghue. 2001. Phylogeny of Malpighiaceae: Evidence from chloroplast ndhF and trnL-F nucleotide sequences. Amer. Jour. Bot. 88: 1830-1846. PDF

Li, J. C. C. Davis, P. Del Tredici, and M. J. Donoghue. 2001. Phylogeny and biogeography of Taxus (Taxaceae) inferred from sequences of the internal transcribed spacer region of nuclear ribosomal DNA. Harvard Papers in Botany 6:267-274. PDF

Li, J., C. C. Davis, M. J. Donoghue, S. Kelley, and P. Del Tredici. 2001. Phylogenetic relationships of Torreya (Taxaceae) inferred from sequences of the nuclear ribosomal DNA ITS region. Harvard Papers in Botany 6: 275-281. PDF

Davis, C. C., P. W. Fritsch, J. Li, and M. J. Donoghue. 2002. Phylogeny and biogeography of Cercis (Fabaceae): Evidence from chloroplast ndhF and nuclear ribosomal ITS sequences. Systematic Botany 27: 289-302. PDF

Davis, C. C., C. D. Bell, S. Mathews, and M. J. Donoghue. 2002. Laurasian migration explains Gondwanan disjunctions: evidence from Malpighiaceae. Proc. Natl. Acad. Sci. USA 99: 6833-6837. PDF

Li, J., P. Del Tredici, S. Yang, and M. J. Donoghue. 2002. Phylogenetic relationships and biogeography of Stewartia (Camellioideae, Theaceae) inferred from nuclear ribosomal DNA ITS sequences. Rhodora 104: 117-133. PDF

Eriksson, T., M. S. Hibbs, A. D. Yoder, C. Delwiche, and M. J. Donoghue, 2003. The phylogeny of Rosoideae (Rosaceae) enhanced by combining sequences of the internal transcribed spacers (ITS) of nuclear ribosomal DNA with the trnL/F region of chloroplast DNA. Int. Jour. Plant Sci. 164: 197-211. PDF

Li, J., D. Zhang, and M. J. Donoghue. 2003. Phylogeny and biogeography of Chamaecyparis (Cupressaceae) inferred from DNA sequences of the nuclear ribosomal ITS region. Rhodora 105: 106-117. PDF

Schultheis, L. M. and M. J. Donoghue. 2004. Molecular phylogeny and biogeography of Ribes (Grossulariaceae), with an emphasis on gooseberries (subg. Grossularia). Syst. Bot. 29: 77-96. PDF

Davis, C. C., C. O. Webb, K. J. Wurdack, C. A. Jaramillo, and M. J. Donoghue. 2005. Explosive radiation of Malpighiales suggests a mid-Cretaceous origin of rain forests. Amer. Nat. E36-E65. PDF

Edwards, E. J. and M. J. Donoghue. 2005. Basal cactus phylogeny: Implications of Pereskia paraphyly for the transition to the cactus life form. Amer. Jour. Bot. 92: 1177-1188. PDF

Kim, S.-T. and M. J. Donoghue. 2008. Molecular phylogeny of Persicaria (Persicarieae, Polygonaceae). Syst. Bot. 33(1): 77-86. PDF

Havill, N. P., C. S. Campbell, T. F. Vining, B. LePage, and M. J. Donoghue. 2008. Phylogeny and biogeography of Tsuga (Pinaceae) inferred from nuclear ribosomal ITS and chloroplast DNA sequence data. Syst. Bot. (in press).

Kim, S-T., S. E. Sultan, and M. J. Donoghue. 2008. Allopolyploid speciation in Persicaria (Polygonaceae): Insights from a low-copy nuclear region. Proc. Nat. Acad. Sci. 105(34): 12370-12375. PDF

Kim, S-T. and M. J. Donoghue. Incongruence between cpDNA and nrITS trees indicates extensive hybridization within Eupersicaria (Polygonaceae). Amer. Jour. Bot. (in review).

Evans, M. E. K., S. A. Smith, R. S. Flynn, and M. J. Donoghue. Climate, niche evolution, and diversification of the Òbird cageÓ evening primroses (Oenothera sections Anogra and Kleinia). Amer. Nat. (in review).

Moore, B. A., M. J. Donoghue, and J. Xiang. Cornus diversification. Evolution (in prep.).