michael donoghue (biogeography / historical ecology)    

Ackerly, D. D. and M. J. Donoghue. 1995. Phylogeny and ecology reconsidered. Jour. Ecology 83:730-733. PDF

Li, J. and M. J. Donoghue. 1999. More molecular evidence for the interspecific relationships of Liquidambar (Hamamelidaceae). Rhodora 101: 87-91. PDF

Li, J., A. L. Bogle, A. S. Klein, and M. J. Donoghue. 2000. Phylogeny and biogeography of Hamamelis (Hamamelidaceae). Harvard Papers in Botany 5: 171-178. PDF

Li, J., D. E. Boufford, and M. J. Donoghue. 2001. Phylogenetics of Buckleya (Santalaceae) based on ITS sequences of nuclear ribosomal DNA. Rhodora 103: 137-150. PDF

Li, J. C. C. Davis, P. Del Tredici, and M. J. Donoghue. 2001. Phylogeny and biogeography of Taxus (Taxaceae) inferred from sequences of the internal transcribed spacer region of nuclear ribosomal DNA. Harvard Papers in Botany 6:267-274. PDF

Li, J., C. C. Davis, M. J. Donoghue, S. Kelley, and P. Del Tredici. 2001. Phylogenetic relationships of Torreya (Taxaceae) inferred from sequences of the nuclear ribosomal DNA ITS region. Harvard Papers in Botany 6: 275-281. PDF

Donoghue. M. J., C. D. Bell, and J. Li. 2001. Phylogenetic patterns in Northern Hemisphere plant geography. Int. J. Plant. Sci. 162: S41-S52. PDF

Manos, P. S. and M. J. Donoghue. 2001. Progress in Northern Hemisphere phytogeography. Int. Jour. Plant Sci. 162: S1-S2. PDF

Davis, C. C., P. W. Fritsch, J. Li, and M. J. Donoghue. 2002. Phylogeny and biogeography of Cercis (Fabaceae): Evidence from chloroplast ndhF and nuclear ribosomal ITS sequences. Systematic Botany 27: 289-302. PDF

Davis, C. C., C. D. Bell, S. Mathews, and M. J. Donoghue. 2002. Laurasian migration explains Gondwanan disjunctions: evidence from Malpighiaceae. Proc. Natl. Acad. Sci. USA 99: 6833-6837. PDF

Li, J., P. Del Tredici, S. Yang, and M. J. Donoghue. 2002. Phylogenetic relationships and biogeography of Stewartia (Camellioideae, Theaceae) inferred from nuclear ribosomal DNA ITS sequences. Rhodora 104: 117-133. PDF

Webb, C. O., D. D. Ackerly, M. McPeek, and M. J. Donoghue. 2002. Phylogenies and community ecology. Ann. Rev. Ecol. Syst. 33: 475-505. PDF

Donoghue, M. J. and B. R. Moore. 2003. Toward an integrative historical biogeography. Integrative and Comparative Biology 43: 261-270. PDF

Li, J., D. Zhang, and M. J. Donoghue. 2003. Phylogeny and biogeography of Chamaecyparis (Cupressaceae) inferred from DNA sequences of the nuclear ribosomal ITS region. Rhodora 105: 106-117. PDF

Feild, T. S., N. C. Arens, J. A. Doyle, T. E. Dawson, and M. J. Donoghue. 2004. Dark and disturbed: a new image of early angiosperm ecology. Paleobiology 30: 82-107. PDF

Schultheis, L. M. and M. J. Donoghue. 2004. Molecular phylogeny and biogeography of Ribes (Grossulariaceae), with an emphasis on gooseberries (subg. Grossularia). Syst. Bot. 29: 77-96. PDF

Donoghue, M. J. and S. A. Smith. 2004. Patterns in the assembly of temperate forests around the Northern Hemisphere. Phil. Trans. Roy. Soc. London B 359: 1633-1644. PDF

Wiens, J. J. and M. J. Donoghue. 2004. Historical biogeography, ecology, and species richness. Trends Ecol. Evol. 19: 639-644. PDF

Davis, C. C., C. O. Webb, K. J. Wurdack, C. A. Jaramillo, and M. J. Donoghue. 2005. Explosive radiation of Malpighiales suggests a mid-Cretaceous origin of rain forests. Amer. Nat. E36-E65. PDF

Winkworth, R.C., and M. J. Donoghue. 2005. Viburnum phylogeny based on combined molecular data: implications for taxonomy and biogeography. Amer. Jour. Bot. 92: 653-666. PDF

Bell, C. D. and M. J. Donoghue. 2005. Phylogeny and biogeography of the Valerianaceae (Dipsacales) with special reference to the South American valerians. Organisms, Evolution, and Diversity 5: 147-159. PDF

Edwards, E. J. and M. J. Donoghue. 2005. Basal cactus phylogeny: Implications of Pereskia paraphyly for the transition to the cactus life form. Amer. Jour. Bot. 92: 1177-1188. PDF

Ree, H. R., B. R. Moore, C. Webb, and M. J. Donoghue. 2005. A likelihood framework for inferring the evolution of geographic range on phylogenetic trees. Evolution 59: 2299-2311. PDF

Webb, C. O., G. S. Gilbert, and M. J. Donoghue. 2006. Phylodiversity dependent seedling mortality, size structure, and disease in a Bornean rain forest. Ecology 87: S123-S131. PDF

Edwards, E. J., C. J. Still, and M. J. Donoghue. 2007. The relevance of phylogeny to studies of global change. Trends Ecol. Evol. 22: 243-249. PDF

Körner, C., M. Donoghue, T. Fabbro, C. Häuser, D. Noguès, M. T. Kalin Arroyo, J. Soberon, L. Speers, E. M. Spehn, H. Sun, A. Tribsch, P. Tykarski, and N. Zbinden. 2007. The Kazbegi Research Agenda of GMBA-DIVERSITAS: For creative use of mountain biodiversity databases. Mountain Research and Development 27: 276-281.PDF

Donoghue, M. J. 2008. A phylogenetic perspective on the distribution of plant diversity. Proc. Nat. Acad. Sci. 105(Suppl. 1): 11549-11555. PDF

Moore, B. R., S. A. Smith, R. H. Ree, and M. J. Donoghue. 2008. Incorporating fossil data in biogeographic inference: a likelihood approach. Evolution (in press).

Havill, N. P., C. S. Campbell, T. F. Vining, B. LePage, and M. J. Donoghue. 2008. Phylogeny and biogeography of Tsuga (Pinaceae) inferred from nuclear ribosomal ITS and chloroplast DNA sequence data. Syst. Bot. (in press).

Cellinese, N., S. A. Smith, E. J. Edwards, S-T. Kim, M. Avramakis, and M. J. Donoghue. 2008. Historical biogeography of the endemic Campanulaceae of Crete. Jour. Biogeography (in press).

Evans, M. E. K., S. A. Smith, R. S. Flynn, and M. J. Donoghue. Climate, niche evolution, and diversification of the Òbird cageÓ evening primroses (Oenothera sections Anogra and Kleinia). Amer. Nat. (in review).

Moore, B. A., M. J. Donoghue, and J. Xiang. Cornus diversification. Evolution (in prep.).

Smith, S. A., R. H. Ree, and M. J. Donoghue. Accuracy of maximum-likelihood inferences of geographic range reconstructions and parameter estimates: a simulation study. Syst. Biol. (in prep.).