michael donoghue (seed plants / angiosperms)    

Doyle, J.A. and M.J. Donoghue. 1986. Relationships of angiosperms and Gnetales: a numerical cladistic analysis. In Systematic and Taxonomic Approaches in Paleobotany; B.A. Thomas and R.A. Spicer (eds.). London: Oxford Univ. Press. PDF

Doyle, J.A. and M.J. Donoghue. 1986. Seed plant phylogeny and the origin of angiosperms: an experimental cladistic approach. Bot. Rev. 52:321-431. PDF

Doyle, J.A. and M.J. Donoghue. 1987. The importance of fossils in elucidating seed plant phylogeny and macroevolution. Rev. Paleobot. Palyn. 50:63-95. PDF

Doyle, J.A. and M.J. Donoghue. 1987. The origin of angiosperms: a cladistic approach. In The Origin of Angiosperms and Biological Consequences, pp.17-49; E.M. Friis, W.G. Chaloner, and P.R. Crane (eds.). Cambridge: Cambridge Univ. Press. PDF

Donoghue, M.J. and J.A. Doyle. 1989. Phylogenetic analysis of angiosperms and the relationships of Hamamelidae. In Evolution, Systematics and Fossil History of the Hamamelidae, Vol.1, pp.17-45; P. Crane and S. Blackmore (eds.). Oxford: Clarendon Press. PDF

Donoghue, M.J. and J.A. Doyle. 1989. Phylogenetic studies of seed plants and angiosperms based on morphological characters. In The Hierarchy of Life, pp.181-193; B. Fernholm, K. Bremer, and H. Jornvall (eds.). Nobel Symposium 70. Amsterdam: Elsevier Publ. PDF

Crane, P.R., M.J. Donoghue, J.A. Doyle, and E.M. Friis. 1989. Angiosperm origins. Nature 342:131. PDF

Donoghue, M.J. and J.A. Doyle. 1991. Angiosperm monophyly. Trends Ecol. Evol. 6:407. PDF

Donoghue, M.J. and S.M. Scheiner. 1992. The evolution of endosperm: a phylogenetic account. In Ecology and Evolution of Plant Reproduction: New Approaches, pp.356-389; R. Wyatt (ed.). New York: Chapman and Hall. PDF

Doyle, J.A. and M.J. Donoghue. 1992. Fossils and seed plant phylogeny revisited. Brittonia 44:89-106. PDF

Doyle, J.A. and M.J. Donoghue. 1993. Phylogenies and angiosperm diversification. Paleobiology 19:141-167. PDF

Judd, W.S., R.W. Sanders, and M.J. Donoghue. 1994. Angiosperm family pairs-- preliminary phylogenetic analyses. Harvard Papers in Botany 5:1-51. PDF

Sanderson, M. J. and M. J. Donoghue. 1994. Shifts in diversification rate with the origin of angiosperms. Science 264:1590-1593. PDF

Doyle, J. A., M. J. Donoghue, and E. A. Zimmer. 1994. Integration of morphological and ribosomal RNA data on the origin of angiosperms. Ann. Missouri Bot. Gard. 81:419-450. PDF

Donoghue, M. J., and S. Mathews. 1998. Duplicate genes and the root of angiosperms, with an example using phytochrome genes. Mol. Phyl. Evol. 9: 489-500. PDF

Feild, T. S., M. A. Zwieniecki, M. J. Donoghue, and N. M. Holbrook. 1998. Stomatal plugs of Drimys winteri (Winteraceae) protect leaves from mist but not drought. Proc. Nat. Acad. Sci. USA 95: 14256-14259. PDF

Mathews, S. and M. J. Donoghue. 1999. The root of angiosperm phylogeny inferred from duplicate phytochrome genes. Science 286: 947-950. PDF

Donoghue. M. J. and J. A. Doyle. 2000. Demise of the anthophyte hypothesis? Current Biology 10: R106-R109. PDF

Feild, T. S., M. A Zweinieki, T. Brodribb, M. J. Donoghue, and N. M. Holbrook. 2000. Structure and function of tracheary elements in Amborella trichopoda. Int. Jour. Plant Sci. 161: 705-712. PDF

Mathews, S. and M. J. Donoghue. 2000. Basal angiosperm phylogeny inferred from duplicate phytochromes A and C. Int. Journ. Plant Sci. 161: S41-S55. PDF

Zanis, M. J., D. E. Soltis, P. S. Soltis, S. Mathews,and M. J. Donoghue. 2002. The root of the angiosperms revisited. Proc. Natl. Acad. Sci. USA 99: 6848-6853. PDF

Donoghue, M. J. 2002. Plants. Pp. 911-918 in Encyclopedia of Evolution, Vol. 2 (M. Pagel, ed.), Oxford Univ. Press. Oxford, UK. PDF

Judd, W. S., C. S. Campbell, E. A. Kellogg, P. F. Stevens, and M. J. Donoghue. 2002. Plant Systematics: A Phylogenetic Approach. 2nd Edition. Sinauer Assoc., Sunderland, MA.

Judd, W. S., K. Nickrent, C. S. Campbell, E. A. Kellogg, P. F. Stevens, and M. J. Donoghue. 2002. A Photo Gallery of Vascular Plants. A Companion to Plant Systematics: A Phylogenetic Approach. 2nd Edition. Sinauer Assoc., Sunderland, MA.

Mathews, S., J. G. Burleigh, and M. J. Donoghue. 2003. Adaptive evolution in the photosensory domain of phytochrome A in early angiosperms. Mol. Biol. Evol. 20: 1087-1097. PDF

Feild, T. S., N. C. Arens, J. A. Doyle, T. E. Dawson, and M. J. Donoghue. 2004. Dark and disturbed: a new image of early angiosperm ecology. Paleobiology 30: 82-107. PDF

Howarth, D. G. and M. J. Donoghue. 2006. Phylogenetic analyses of the ÒECE Ó (CYC/TB1) clade reveal duplications that predate the core eudicots. Proc. Nat. Acad. Sci. USA 103: 9101-9106. PDF

Cantino, P. D., J. A. Doyle, S. W. Graham, W. S. Judd, R. G. Olmstead, D. E. Soltis, P. S. Soltis, and M. J. Donoghue. 2007. Towards a phylogenetic nomenclature of Tracheophyta. Taxon 56(3): 822-846. PDF

Cantino, P. D., J. A. Doyle, S. W. Graham, W. S. Judd, R. G. Olmstead, D. E. Soltis, P. S. Soltis, and M. J. Donoghue. 2007. Towards a phylogenetic nomenclature of Tracheophyta. Taxon 56(3): E1-E44 (Electronic Supplement). PDF

Judd, W. S., C. S. Campbell, E. A. Kellogg, P. F. Stevens, and M. J. Donoghue. 2007. Plant Systematics: A Phylogenetic Approach. 3rd Edition. Sinauer Assoc., Sunderland, MA.

Judd, W. S., D. Nickrent, K. Robertson, J. R. Abbott, C. S. Campbell, B. S. Carlsward, M. J. Donoghue , and E. A. Kellogg. 2007. Photo Gallery of Vascular Plants. A CD companion to Plant Systematics: A Phylogenetic Approach. 3rd Edition. Sinauer Assoc., Sunderland, MA.